BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E10SP1|AL430073
(916 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1509 0.0
>3x_Contig1302
Length = 5215
Score = 1509 bits (757), Expect = 0.0
Identities = 763/769 (99%)
Strand = Plus / Minus
Query: 148 cccttcaacttaaaaggttacaagcgtacacagagttaacacagaaatagtcaacgggtt 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5215 cccttcaacttaaaaggttacaagcgtacacagagttaacacagaaatagtcaacgggtt 5156
Query: 208 cacgatacagtcccaatacatatctgtacctgatcgcggctgcgggacattaaagtactt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5155 cacgatacagtcccaatacatatctgtacctgatcgcggctgcgggacattaaagtactt 5096
Query: 268 tctgtcattctaatttaaacgaagaaatcaattgatatcttgagctaattcatgtttttg 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5095 tctgtcattctaatttaaacgaagaaatcaattgatatcttgagctaattcatgtttttg 5036
Query: 328 tgatactatataagtataaagggtatcatcttcctggattcaatcttgaaccgtagatta 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5035 tgatactatataagtataaagggtatcatcttcctggattcaatcttgaaccgtagatta 4976
Query: 388 ataacttataagagactaaatcccgctagttagatgttttatgtgccgtattcgcttgca 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4975 ataacttataagagactaaatcccgctagttagatgttttatgtgccgtattcgcttgca 4916
Query: 448 ttctttaatatgagccattctgttccacgttaagcacagaaaaataaaamattccaaagt 507
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4915 ttctttaatatgagccattctgttccacgttaagcacagaaaaataaaaaattccaaagt 4856
Query: 508 ttaactgaaagatgaatcagttgatcttaagcmagtmaaaacgtcggacggctcaaccaa 567
|||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||
Sbjct: 4855 ttaactgaaagatgaatcagttgatcttaagcaagtaaaaacgtcggacggctcaaccaa 4796
Query: 568 tcaaccgagcaaatacctcaaggacaaataaactatgamaattgatagtacaccattgav 627
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4795 tcaaccgagcaaatacctcaaggacaaataaactatgaaaattgatagtacaccattgaa 4736
Query: 628 agamggtcaattaccattcgataaagaagtggttagaaaagccgctttggacttgaccga 687
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4735 agaaggtcaattaccattcgataaagaagtggttagaaaagccgctttggacttgaccga 4676
Query: 688 atctgtagaatcctggaagaaggggaagctatacaagtatacgctagatccagaaaattg 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4675 atctgtagaatcctggaagaaggggaagctatacaagtatacgctagatccagaaaattg 4616
Query: 748 taccaatgatcccaagtgtgaagtgcaaacctacgggcagaccattggtggtgattattg 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4615 taccaatgatcccaagtgtgaagtgcaaacctacgggcagaccattggtggtgattattg 4556
Query: 808 gttatgtagaagatcatttcacaacattaatcccgaaaattaccgcaaagtagtcgaagt 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4555 gttatgtagaagatcatttcacaacattaatcccgaaaattaccgcaaagtagtcgaagt 4496
Query: 868 attgaacggtagtcaatgggatgcgagtctcgagaaatgggttatgccc 916
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4495 attgaacggtagtcaatgggatgcgagtctcgagaaatgggttatgccc 4447
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5864
Number of Sequences: 1807
Number of extensions: 5864
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)